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Research PaperResearchia:202608.10019

An Entropy-based Coefficient of Determination with Adjustment of Optimization Bias

Longhai Li

Abstract

Classical likelihood-ratio tests and $Ξ”$AIC exacerbate the statistical significance crisis by scaling with sample size, often flagging negligible improvements as highly significant. While causal estimands like the average treatment effect (ATE) quantify practical magnitude, their reliance on the expectation operator ties them to the data's original coordinate scale. Furthermore, existing pseudo-$R^2$ metrics are inadequate: variance-based measures ignore higher-order distributional changes, and ...

Submitted: August 10, 2026Subjects: Biology; Biotechnology

Description / Details

Classical likelihood-ratio tests and ΔΔAIC exacerbate the statistical significance crisis by scaling with sample size, often flagging negligible improvements as highly significant. While causal estimands like the average treatment effect (ATE) quantify practical magnitude, their reliance on the expectation operator ties them to the data's original coordinate scale. Furthermore, existing pseudo-R2R^2 metrics are inadequate: variance-based measures ignore higher-order distributional changes, and current formulations lack invariance to monotone transformations. We resolve these limitations by introducing Entropic Variance (EV) as a rigorous, scale-independent generalization of error variance in ordinary least squares. We define the population EV-based parameter, ρV2ρ^2_V, which projects unbounded cross-entropy onto a standardized [0,1][0,1] scale, and establish that the EV-based FVF_\text{V} statistic asymptotically follows an FF-distribution. Building on these distributional properties, we propose two estimators: the empirical population RSV2R^2_{\text{SV}} and the out-of-sample predictive RSVP2R^2_{\text{SVP}}. Both are derived by exponentiating per-observation cross-entropy and incorporate a degrees-of-freedom correction for training optimism. Leveraging the FVF_\text{V}-distribution, we derive refined pp-values and confidence intervals for ρV2ρ^2_V without requiring intractable Fisher information matrices. Simulation studies and a Parkinson's disease microbiome application demonstrate the superiority of variable selection via these EV-R2R^2 metrics. Notably, evaluating the RSVP2R^2_{\text{SVP}} of a LASSO path via data-splitting reduced false discovery rates from 80% to 6% in simulations while fully preserving signal recall.


Source: arXiv:2608.06624v1 - http://arxiv.org/abs/2608.06624v1 PDF: https://arxiv.org/pdf/2608.06624v1 Original Link: http://arxiv.org/abs/2608.06624v1

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Submission Info
Date:
Aug 10, 2026
Topic:
Biotechnology
Area:
Biology
Comments:
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