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Research PaperResearchia:202602.13092

Markov State Models for Tracking Reaction Dynamics on Catalytic Nanoparticles

Caitlin A. McCandler

Abstract

Markov state models (MSMs) are a powerful tool to analyze and coarse-grain complex dynamical data into interpretable kinetic processes. This capability is particularly important in heterogeneous catalysis, where a medley of reactants and intermediates interact on surfaces that might simultaneously experience structural fluctuations. For these very complex systems, standard transition state theory (TST) approaches are no longer appropriate, motivating alternative approaches that can retain dynami...

Submitted: February 13, 2026Subjects: Chemistry; Chemistry

Description / Details

Markov state models (MSMs) are a powerful tool to analyze and coarse-grain complex dynamical data into interpretable kinetic processes. This capability is particularly important in heterogeneous catalysis, where a medley of reactants and intermediates interact on surfaces that might simultaneously experience structural fluctuations. For these very complex systems, standard transition state theory (TST) approaches are no longer appropriate, motivating alternative approaches that can retain dynamical complexity while providing physical insight. With machine learned interatomic potentials being more and more ubiquitous, directly simulating complex catalytic systems with molecular dynamics (MD) is becoming increasingly feasible. Extending MSMs to dynamically coarse grain MD simulation data of catalytic processes, we analyze hydrogen dynamics on rhodium catalysts with slab and nanoparticle geometries over a range of hydrogen surface concentrations. Somewhat counterintuitively, nanoparticle features, such as corners and edges, effectively slow down the association/dissociation process, and the cooperative behavior of hydrogen-hydrogen interactions leads to a non-monotonic concentration dependence of the rates, which would not be predicted with standard TST.


Source: arXiv:2602.12037v1 - http://arxiv.org/abs/2602.12037v1 PDF: https://arxiv.org/pdf/2602.12037v1 Original Link: http://arxiv.org/abs/2602.12037v1

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Date:
Feb 13, 2026
Topic:
Chemistry
Area:
Chemistry
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